Compare commits
No commits in common. "draft" and "master" have entirely different histories.
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@ -6,12 +6,6 @@ When storing simple files directly on the file-system is enough.
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This project is a work in progress.
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This project is a work in progress.
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# Constraints (WIP)
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TODO:
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- parallelism: run dodb on several threads (solved by a locking system)
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- fs data integrity: in case of a crash, dodb won't corrupt data on disk (solved by a temp file on the same filesystem, then a simple mv)
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# Crystal version
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# Crystal version
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Follow [this link for the Crystal version of DODB][dodbcr].
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Follow [this link for the Crystal version of DODB][dodbcr].
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10
TODO.md
10
TODO.md
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@ -1,10 +0,0 @@
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- Warning when indexes overlap (data add or update)
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- Data integrity on update (create temporary file with new data, rename old data file, move temporary file, remove old data file)
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- Handle errors (such as permissions) in an explicit way
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- Grooming (create a consistent and convenient API, comments)
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- Improve data search
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- Check for TODOs
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- Check types.
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- Switch to CBOR format.
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- Verify uniqueness before adding data.
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- Allow indexes to be NIL.
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22
dodb.asd
22
dodb.asd
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@ -1,22 +0,0 @@
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(defsystem "dodb"
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:version "0.1.0"
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:author "Philippe PITTOLI"
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:license "ISC"
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:depends-on ("osicat")
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:components ((:module "src"
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:components
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((:file "util")
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(:file "main"))))
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:description "When storing simple files directly on the file-system is enough."
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:in-order-to ((test-op (test-op "dodb/tests"))))
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(defsystem "dodb/tests"
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:author "Philippe PITTOLI"
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:license "ISC"
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:depends-on ("dodb"
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"rove")
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:components ((:module "tests"
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:components
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((:file "main"))))
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:description "Test system for dodb"
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:perform (test-op (op c) (symbol-call :rove :run c)))
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368
src/main.lisp
368
src/main.lisp
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@ -1,368 +0,0 @@
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(declaim (optimize (speed 3) (safety 3)))
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(defpackage :dodb
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(:use :common-lisp :util :osicat)
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; TODO
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(:export
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:db/new ; new database
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:db/new-index ; symlinks based on an unique ID
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:db/new-partition ; symlinks based on a shared ID
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:db/add ; add a new value in the DB
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:db/update ; update a value in the DB
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:db/del ; del a value from the DB
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:db/get-by-index ;
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:db/get-by-partition ;
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:db/drop-everything ;
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:db-data ;
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))
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(in-package dodb)
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(declaim (ftype (function (pathname) integer) filename->integer))
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(declaim (inline filename->integer))
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(defun filename->integer (filename)
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(declare (type pathname filename))
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(parse-integer (pathname-name filename))) ; pathname-name returns the basename
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(declaim (ftype (function (string) string) to-upper-case))
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(declaim (inline to-upper-case))
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(defun to-upper-case (some-string)
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(declare (type string some-string))
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(format nil "~@:(~a~)" some-string))
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; Example: 18 -> 000000000000018
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(declaim (ftype (function (integer) string) number->filename))
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(declaim (inline number->filename))
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(defun number->filename (number)
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(declare (type integer number))
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(format nil "~15,'0D" number))
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(declaim (ftype (function (character) boolean) is-forbidden-character-p))
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(declaim (inline is-forbidden-character-p))
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(defun is-forbidden-character-p (some-char)
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(declare (type character some-char))
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(member some-char (list #\/ #\\)))
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(declaim (ftype (function (string) string) protect-file-system))
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(declaim (inline protect-file-system))
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(defun protect-file-system (value)
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(declare (type string value))
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(substitute-if #\_ #'is-forbidden-character-p value))
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(declaim (ftype (function (atom) string) value->safe-string))
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(defun value->safe-string (value)
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(protect-file-system (typecase value
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(string value)
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(symbol (symbol-name value))
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(t (format nil "~A" value)))))
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; index = 1-1
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; partition = 1-n
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(defstruct db
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path ; Path
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(indexes (make-hash-table)) ; {String => #'FUNCTION-NAME}
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(partitions (make-hash-table)) ; {String => #'FUNCTION-NAME}
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(current-index 0) ; Int
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(data (make-hash-table))) ; {Int -> struct}
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; db/new ensures directory '<path>/data/' exist,
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; then loads values from existing files, if any, and puts them into db-data.
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(declaim (ftype (function (string) db) db/new))
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(defun db/new (path)
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(declare (type string path))
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(let ((data (make-hash-table))
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(data-dir-path (concatenate 'string path "/data/"))
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(current-index 0))
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(ensure-directories-exist data-dir-path)
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(loop for filename in (osicat:list-directory data-dir-path)
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do (let ((id (filename->integer filename))
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(value (util:read-object-from-file filename)))
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(if (> id current-index)
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(setf current-index id))
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(setf (gethash id data) value)))
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(make-db
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:path path
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:data data
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:current-index current-index)))
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; Example: returns "./storage/cars/indexes/by_name/".
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(declaim (ftype (function (string string) string) db/index/get-directory-path))
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(declaim (inline db/index/get-directory-pathispatch))
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(defun db/index/get-directory-path (dbpath index-name)
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(declare (type string dbpath index-name))
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(concatenate 'string dbpath "/indexes/by_" index-name "/"))
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; Example: returns "./storage/cars/partitions/by_color/Red/".
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(declaim (ftype (function (string string string) string) db/partition/get-directory-path))
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(defun db/partition/get-directory-path (dbpath name object-attribute)
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(declare (type string dbpath name object-attribute))
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(concatenate 'string dbpath "/partitions/by_" name "/" object-attribute "/"))
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; Example: "./storage/cars/" "name" #'vehicle-name object -> "./storage/cars/indexes/by_name/Corvet".
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(declaim (ftype (function (string string function atom) string) db/index/get-symlink-path))
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(defun db/index/get-symlink-path (dbpath index-name fsymbol object)
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(declare (type string dbpath index-name))
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(declare (type function fsymbol))
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(let* ((value (funcall fsymbol object))
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(symlink-basename (value->safe-string value)))
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(concatenate 'string
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(db/index/get-directory-path dbpath index-name)
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symlink-basename)))
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; Example: "./storage/cars/" "name" #'vehicle-name object "0000000015"
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; -> (osicat:make-link "./storage/cars/indexes/by_name/Corvet"
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; :target "../../data/0000000015"
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; :hard nil)
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(declaim (ftype (function (string string function atom string) null) db/index/new))
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(defun db/index/new (dbpath index-name fsymbol object file-name)
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(declare (type string dbpath index-name file-name))
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(declare (type function fsymbol))
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(let ((symlink-path (db/index/get-symlink-path dbpath index-name fsymbol object)))
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(declare (type string symlink-path))
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; works even when the database directory is moved
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(osicat:make-link symlink-path
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:target (concatenate 'string "../../data/" file-name)
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:hard nil))
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(values nil))
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(declaim (ftype (function (string string function atom) null) db/index/del))
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(defun db/index/del (dbpath index-name fsymbol object)
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(declare (type string dbpath index-name))
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(declare (type function fsymbol))
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(delete-file (db/index/get-symlink-path dbpath index-name fsymbol object))
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(values nil))
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; Example: "./storage/cars/" "color" #'vehicle-color object "0000000015".
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; -> "./storage/cars/partitions/by_color/Red/0000000015".
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(declaim (ftype (function (string string function atom string) string) db/partition/get-symlink-path))
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(defun db/partition/get-symlink-path (dbpath partition-name fsymbol object file-name)
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(declare (type string dbpath partition-name file-name))
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(declare (type function fsymbol))
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(let* ((object-attribute (funcall fsymbol object))
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(safe-value (value->safe-string object-attribute))
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; example: "./storage/cars/partitions/by_color/Red/"
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(dirpath (db/partition/get-directory-path dbpath partition-name safe-value)))
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(concatenate 'string dirpath file-name)))
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; Example: "./storage/cars/" "color" #'vehicle-color object "0000000015"
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; -> (osicat:make-link "./storage/cars/partitions/by_color/Red/0000000015"
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; :target "../../../data/0000000015"
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; :hard nil)
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(declaim (ftype (function (string string function atom string) null) db/partition/new))
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(defun db/partition/new (dbpath partition-name fsymbol object file-name)
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(declare (type string dbpath partition-name file-name))
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(declare (type function fsymbol))
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(let ((symlink-path
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(db/partition/get-symlink-path dbpath partition-name fsymbol object file-name)))
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(ensure-directories-exist symlink-path)
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; works even when the database directory is moved
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(osicat:make-link symlink-path
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:target (concatenate 'string "../../../data/" file-name)
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:hard nil))
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(values nil))
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||||||
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||||||
(declaim (ftype (function (string string function atom string) null) db/partition/del))
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||||||
(defun db/partition/del (dbpath partition-name fsymbol object file-basename)
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(declare (type string dbpath partition-name file-basename))
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(declare (type function fsymbol))
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(delete-file (db/partition/get-symlink-path dbpath partition-name fsymbol object file-basename))
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(values nil))
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||||||
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||||||
(declaim (ftype (function (db string function) null) db/new-index))
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(defun db/new-index (database index-name fsymbol)
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(declare (type db database))
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|
||||||
(declare (type string index-name))
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||||||
(declare (type function fsymbol))
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|
||||||
(let ((dbpath (db-path database))
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|
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(index-name (value->safe-string index-name)))
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|
||||||
; create a directory for the indexes
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|
||||||
(ensure-directories-exist
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|
||||||
(concatenate 'string dbpath "/indexes/by_" index-name "/"))
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|
||||||
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|
||||||
; add this new index to the list
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|
||||||
(setf (gethash index-name (db-indexes database)) fsymbol)
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|
||||||
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|
||||||
; generate index for all DB elements
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|
||||||
(maphash #'(lambda (number object)
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|
||||||
(handler-case (db/index/new dbpath index-name fsymbol object (number->filename number))
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|
||||||
(OSICAT-POSIX:EEXIST ()
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|
||||||
(format t "dodb:db/new-index: symlink already exists, ignoring.~&"))))
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|
||||||
(db-data database)))
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|
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(values nil))
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|
||||||
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|
||||||
(declaim (ftype (function (string string function atom string atom) null) db/partition/update))
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|
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(defun db/partition/update (dbpath partition-name fsymbol object file-name old-object)
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|
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(declare (type string dbpath partition-name file-name))
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|
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(declare (type function fsymbol))
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|
||||||
(let ((new-value (funcall fsymbol object))
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|
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(old-value (funcall fsymbol old-object)))
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|
||||||
(if (not (equal new-value old-value))
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|
||||||
(progn
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|
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; delete old partition
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|
||||||
(db/partition/del dbpath partition-name fsymbol old-object file-name)
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|
||||||
; create new partition
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|
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(db/partition/new dbpath partition-name fsymbol object file-name)))))
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|
||||||
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|
||||||
(declaim (ftype (function (db string function) null) db/new-partition))
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|
||||||
(defun db/new-partition (database partition-name fsymbol)
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|
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(declare (type db database))
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|
||||||
(declare (type string partition-name))
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|
||||||
(declare (type function fsymbol))
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|
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(let ((dbpath (db-path database))
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|
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(partition-name (value->safe-string partition-name)))
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|
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; create a directory for the partitions
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|
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(ensure-directories-exist
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|
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(concatenate 'string dbpath "/partitions/by_" partition-name "/"))
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|
||||||
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|
||||||
; add this new partition to the list
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|
||||||
(setf (gethash partition-name (db-partitions database)) fsymbol)
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|
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|
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; generate partition for all DB elements
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|
||||||
(maphash #'(lambda (number object)
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|
||||||
(handler-case (db/partition/new dbpath partition-name fsymbol object (number->filename number))
|
|
||||||
(OSICAT-POSIX:EEXIST ()
|
|
||||||
(format t "dodb:db/new-partition: symlink already exists, ignoring.~&"))))
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|
||||||
(db-data database)))
|
|
||||||
(values nil))
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|
||||||
|
|
||||||
; Example: "./storage/cars/data/000000000000018".
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|
||||||
(declaim (ftype (function (string string) string) get-filepath))
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|
||||||
(defun get-filepath (dbpath file-name)
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|
||||||
(declare (type string dbpath file-name))
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|
||||||
(concatenate 'string dbpath "/data/" file-name))
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|
||||||
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|
||||||
(declaim (ftype (function (db atom) integer) db/add))
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|
||||||
(defun db/add (database object)
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|
||||||
(declare (type db database))
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|
||||||
(incf (db-current-index database))
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|
||||||
(let* ((file-basename (number->filename (db-current-index database)))
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|
||||||
(dbpath (db-path database))
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|
||||||
(tmp-file-basename (concatenate 'string file-basename "_tmp"))
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|
||||||
(tmp-file-path (get-filepath dbpath tmp-file-basename)))
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|
||||||
|
|
||||||
; write object to temporary file
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|
||||||
(util:write-object-to-file object tmp-file-path)
|
|
||||||
|
|
||||||
; rename the temporary file
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|
||||||
(rename-file tmp-file-path file-basename)
|
|
||||||
|
|
||||||
; generate indexes
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|
||||||
(maphash #'(lambda (index-name fsymbol)
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|
||||||
(db/index/new dbpath index-name fsymbol object file-basename))
|
|
||||||
(db-indexes database))
|
|
||||||
|
|
||||||
; generate partitions
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|
||||||
(maphash #'(lambda (partition-name fsymbol)
|
|
||||||
(db/partition/new dbpath partition-name fsymbol object file-basename))
|
|
||||||
(db-partitions database)))
|
|
||||||
|
|
||||||
; store new in-memory data
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|
||||||
; database.data[database.current-index] = object
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|
||||||
(setf (gethash (db-current-index database) (db-data database)) object)
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|
||||||
(db-current-index database))
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|
||||||
|
|
||||||
(declaim (ftype (function (db integer) null) db/del))
|
|
||||||
(defun db/del (database object-index)
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|
||||||
(declare (type db database))
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|
||||||
(declare (type integer object-index))
|
|
||||||
(let ((file-basename (number->filename object-index))
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|
||||||
(dbpath (db-path database))
|
|
||||||
(object (gethash object-index (db-data database))))
|
|
||||||
; remove data file
|
|
||||||
(delete-file (get-filepath dbpath file-basename))
|
|
||||||
|
|
||||||
; handle indexes
|
|
||||||
(maphash #'(lambda (index-name fsymbol)
|
|
||||||
(db/index/del dbpath index-name fsymbol object))
|
|
||||||
(db-indexes database))
|
|
||||||
|
|
||||||
; handle partitions
|
|
||||||
(maphash #'(lambda (partition-name fsymbol)
|
|
||||||
(db/partition/del dbpath partition-name fsymbol object file-basename))
|
|
||||||
(db-partitions database))
|
|
||||||
|
|
||||||
; remove in-memory data
|
|
||||||
(remhash object-index (db-data database)))
|
|
||||||
(values nil))
|
|
||||||
|
|
||||||
; Search for the data from the FS.
|
|
||||||
(declaim (ftype (function (db string atom) integer) db/get-by-index))
|
|
||||||
(defun db/get-by-index (database index-name attribute-value)
|
|
||||||
(declare (type db database))
|
|
||||||
(declare (type string index-name))
|
|
||||||
(let ((value (value->safe-string attribute-value)))
|
|
||||||
(filename->integer
|
|
||||||
(osicat:read-link
|
|
||||||
(concatenate 'string
|
|
||||||
(db/index/get-directory-path (db-path database) index-name) "/" value)))))
|
|
||||||
|
|
||||||
; Search for the data from the FS.
|
|
||||||
(declaim (ftype (function (db string atom) cons) db/get-by-partition))
|
|
||||||
(defun db/get-by-partition (database name attribute-value)
|
|
||||||
(declare (type db database))
|
|
||||||
(declare (type string name))
|
|
||||||
(let ((value (value->safe-string attribute-value))
|
|
||||||
(dbpath (db-path database)))
|
|
||||||
(loop for filename in (osicat:list-directory (db/partition/get-directory-path dbpath name value))
|
|
||||||
collect (filename->integer filename))))
|
|
||||||
|
|
||||||
(declaim (ftype (function (string string function atom string atom) null) db/index/update))
|
|
||||||
(defun db/index/update (dbpath index-name fsymbol object file-name old-object)
|
|
||||||
(declare (type string dbpath index-name file-name))
|
|
||||||
(declare (type function fsymbol))
|
|
||||||
(let ((new-value (funcall fsymbol object))
|
|
||||||
(old-value (funcall fsymbol old-object))
|
|
||||||
(symlink-path (db/index/get-symlink-path dbpath index-name fsymbol object)))
|
|
||||||
(if (not (equal new-value old-value))
|
|
||||||
; display a message in case the new index is already used by another object
|
|
||||||
(if (probe-file symlink-path)
|
|
||||||
(format t "dodb:db/index/update: the value ~a is already used by another object.~&" new-value)
|
|
||||||
(progn
|
|
||||||
; delete old index
|
|
||||||
(db/index/del dbpath index-name fsymbol old-object)
|
|
||||||
; create new index
|
|
||||||
(db/index/new dbpath index-name fsymbol object file-name))))))
|
|
||||||
|
|
||||||
; TODO: check database integrity (redundancy)
|
|
||||||
; TODO: locking
|
|
||||||
(declaim (ftype (function (db integer) null) db/update))
|
|
||||||
(defun db/update (database object-index)
|
|
||||||
(declare (type db database))
|
|
||||||
(declare (type integer object-index))
|
|
||||||
(let* ((object (gethash object-index (db-data database)))
|
|
||||||
(dbpath (db-path database))
|
|
||||||
(file-basename (number->filename object-index))
|
|
||||||
(file-path (get-filepath dbpath file-basename))
|
|
||||||
(old-object (util:read-object-from-file file-path))
|
|
||||||
(tmp-file-basename (concatenate 'string file-basename "_tmp"))
|
|
||||||
(tmp-file-path (get-filepath dbpath tmp-file-basename)))
|
|
||||||
|
|
||||||
; write object to temporary file
|
|
||||||
(util:write-object-to-file object tmp-file-path)
|
|
||||||
|
|
||||||
(delete-file file-path)
|
|
||||||
|
|
||||||
; rename the temporary file
|
|
||||||
(rename-file tmp-file-path file-basename)
|
|
||||||
|
|
||||||
; handle indexes
|
|
||||||
(maphash #'(lambda (index-name fsymbol)
|
|
||||||
(db/index/update dbpath index-name fsymbol object file-basename old-object))
|
|
||||||
(db-indexes database))
|
|
||||||
|
|
||||||
; handle partitions
|
|
||||||
(maphash #'(lambda (partition-name fsymbol)
|
|
||||||
(db/partition/update dbpath partition-name fsymbol object file-basename old-object))
|
|
||||||
(db-partitions database)))
|
|
||||||
(values nil))
|
|
||||||
|
|
||||||
(declaim (ftype (function (db) null) db/drop-everything))
|
|
||||||
(defun db/drop-everything (database)
|
|
||||||
(declare (type db database))
|
|
||||||
(osicat:delete-directory-and-files (db-path database))
|
|
||||||
(clrhash (db-data database))
|
|
||||||
(values nil))
|
|
|
@ -1,32 +0,0 @@
|
||||||
(defpackage :dodb-scenario
|
|
||||||
(:use :common-lisp :dodb))
|
|
||||||
(in-package dodb-scenario)
|
|
||||||
|
|
||||||
(defstruct vehicle name color (nb-of-lights 4))
|
|
||||||
|
|
||||||
(defparameter cars (dodb:db/new "/tmp/storage/cars/"))
|
|
||||||
|
|
||||||
(dodb:db/add cars (make-vehicle :name "Corvet" :color "Red"))
|
|
||||||
(dodb:db/add cars (make-vehicle :name "Ferrari" :color "Red"))
|
|
||||||
(dodb:db/add cars (make-vehicle :name "Deudeuch" :color "Beige"))
|
|
||||||
(dodb:db/add cars (make-vehicle :name "BMW" :color "Blue"))
|
|
||||||
(dodb:db/add cars (make-vehicle :name "Suzuki Wagon" :color "Blue" :nb-of-lights 6))
|
|
||||||
|
|
||||||
(dodb:db/new-index cars "name" #'vehicle-name)
|
|
||||||
(dodb:db/new-partition cars "color" #'vehicle-color)
|
|
||||||
(dodb:db/new-partition cars "nb-of-lights" #'vehicle-nb-of-lights)
|
|
||||||
|
|
||||||
(dodb:db/new-partition cars "\ot//her\\par/tit" #'vehicle-color)
|
|
||||||
(dodb:db/new-index cars "\ot//her\\i/name/r" #'vehicle-name)
|
|
||||||
|
|
||||||
(format t "~&~S~&" cars)
|
|
||||||
|
|
||||||
(format t "db/get-by-index ~S~&" (dodb:db/get-by-index cars "name" "Corvet"))
|
|
||||||
|
|
||||||
(format t "db/get-by-partition red cars:~&")
|
|
||||||
(loop for car in (dodb:db/get-by-partition cars "color" "Red")
|
|
||||||
do (format t "- ~S~&" car))
|
|
||||||
|
|
||||||
(let ((suzuki (dodb:db/get-by-index cars "name" "Suzuki Wagon")))
|
|
||||||
(setf (vehicle-color (gethash suzuki (dodb:db-data cars))) "White")
|
|
||||||
(dodb:db/update cars suzuki))
|
|
|
@ -1,26 +0,0 @@
|
||||||
(defpackage :util
|
|
||||||
(:use :common-lisp)
|
|
||||||
(:nicknames :ut)
|
|
||||||
(:export :write-object-to-file
|
|
||||||
:read-file
|
|
||||||
:read-object-from-file))
|
|
||||||
(in-package util)
|
|
||||||
|
|
||||||
(defun read-file (infile)
|
|
||||||
(with-open-file (instream infile
|
|
||||||
:direction :input
|
|
||||||
:if-does-not-exist nil)
|
|
||||||
(when instream
|
|
||||||
(let ((string (make-string (file-length instream))))
|
|
||||||
(read-sequence string instream)
|
|
||||||
string))))
|
|
||||||
|
|
||||||
(defun read-object-from-file (infile)
|
|
||||||
(read-from-string (read-file infile)))
|
|
||||||
|
|
||||||
(defun write-object-to-file (object outfile)
|
|
||||||
(with-open-file (my-file outfile
|
|
||||||
:direction :output
|
|
||||||
:if-exists :supersede
|
|
||||||
:if-does-not-exist :create)
|
|
||||||
(format my-file "~&~S~&" object)))
|
|
|
@ -1,11 +0,0 @@
|
||||||
(defpackage dodb/tests/main
|
|
||||||
(:use :cl
|
|
||||||
:dodb
|
|
||||||
:rove))
|
|
||||||
(in-package :dodb/tests/main)
|
|
||||||
|
|
||||||
;; NOTE: To run this test file, execute `(asdf:test-system :dodb)' in your Lisp.
|
|
||||||
|
|
||||||
(deftest test-target-1
|
|
||||||
(testing "should (= 1 1) to be true"
|
|
||||||
(ok (= 1 1))))
|
|
Loading…
Reference in New Issue